Biography

Zakia Khatun is a recent graduate of the ‘Medical Imaging and Applications’ program which is an Erasmus Mundus Joint master’s degree; fully funded by the European Union. Her research focuses on the processing and analysis of medical images with an emphasis on machine/deep learning. She obtained a Bachelor of Science in ‘Electrical & Electronic Engineering’ from ‘American International University-Bangladesh’ with a CGPA of 3.97 out of 4.00. Her undergraduate major was ‘Biomedical Instrumentation Measurement & Design’. She received the ‘Dean’s Award’, awarded for her final year undergraduate project. She also benefited from a merit-based scholarship throughout her undergraduate studies. She has also been actively involved in volunteering at ‘IEEE AIUB Student Branch’. Besides her research and personal life, she enjoys photography, cooking, handcrafting and going out to feel nature.

Interests

  • Medical Image Processing & Analysis
  • Computer Vision
  • Artificial Intelligence
  • Machine Learning
  • Deep learning

Education

  • Erasmus Mundus Joint Master Degree in Medical Imaging and Applications (MAIA) program, 2018-2020

    University of Burgundy (France) ; University of Cassino (Italy) ; University of Girona (Spain)

  • B.Sc. in Electrical & Electronic Engineering (EEE), 2014-2018

    American International University-Bangladesh (AIUB), Bangladesh

Accomplish­ments

Erasmus Mundus Joint Master Degree Scholarship in Medical Imaging and Applications (MAIA)

This master is a two-year study program divided into four semesters designed and developed to make sure a transparent and structured educational progression within the field of medical image analysis. This program is fully funded by the European Union.
See certificate

Dean’s Award for Undergraduate Final Year Project

It is awarded due to securing the 7th position out of 155 projects/theses for the academic year of 2017-2018.
See certificate

Merit Based Scholarship in Electrical & Electronic Engineering (EEE)

This bachelor degree is a four-year study program which concerns the sensible applications of electricity altogether its forms, including those of the arena of electronics. And this scholarship is awarded for demonstrating academic excellence throughout the academic years.

Dean’s List Honour

This honour was made for continuing academic excellence in each semester.

Projects

Survival Time Prediction of Metastatic Melanoma Patients by Computed Tomography using Convolutional Neural Networks

Survival Time Prediction of Metastatic Melanoma Patients by Computed Tomography using Convolutional Neural Networks

Our objective is to study the prediction of the survival time of patients with metastatic melanoma in terms of 1-year survival as a binary classification. Dataset used in this study contains CTs of 71 patients with metastatic melanoma who are studied at Universite Clermont Auvergne Hospital. The number of lesions per patient varies from 1 to 11. To reach the objective, the survival time is anticipated using the accessible CT data as input of a 3D CNN. In this category, survival time is anticipated using full CT volumes and also from extracted 3D CT patches containing lesion regions. Here, the patches are extracted given the ground truth masks of the lesions. Moreover, segmentation of lesions coming from different organs is performed using two different 3D CNNs to examine the prediction of survival time based on newly extracted 3D CT patches. These new patches are extracted using our anticipated segmentation predicted masks of lesions. As the final test, it is also inspected whether aggregated deep segmentation feature map can help to predict survival time being an extra input channel to the CT data for 3D CNN or not. Our study shows that using aggregated deep segmentation feature map as an extra input channel to CT data comes about in superior performance in survival time prediction compared to using as it were only 3D CT patches as input. In expansion, the prediction of survival time based on newly extracted 3D CT patches coming from our segmentation predicted masks is similar to the survival prediction using the 3D CT patches coming from ground truth masks. Further investigation of this study can be the addition of radiomic features with aggregated deep segmentation feature map as additional input to CT data besides experimenting on bigger dataset. Including clinical data such as age, sex, etc. can as well play a vital role.

Co-curricular activities

 
 
 
 
 

Guest Speaker

IEEE AIUB Student Branch

Aug 2019 – Aug 2019 Dhaka, Bangladesh
Guest speaker at a seminar on’Road to Erasmus+ Scholarship’, organized by IEEE AIUB Student Branch at American Internation University-Bangladesh.
 
 
 
 
 

Member of Event Coordination Committee

IEEE Region-10 Student Professional Awareness Venture (SPAVe), supported by IEEE USA

Dec 2016 – Dec 2016 Dhaka
SPAVe stands for Student Professional Awareness Venture. SPAVe took place for the first time in the history of IEEE Bangladesh Section. This venture was supported by IEEE, IEEE USA, IEEE R10, IEEE Bangladesh Section.
 
 
 
 
 

Campus Ambassador

IEEE Bangladesh Section SYW Congress-2016

Oct 2016 – Nov 2016 Dhaka
The largest annual event of IEEE Bangladesh Section.
 
 
 
 
 

Volunteer

AIUB Engineering Jubilation-2016

Jun 2016 – Jul 2016 Dhaka
 
 
 
 
 

Contact